| Course title | |||||
| バイオインフォマティクス特論 [Bioinformatics] | |||||
| Course category | courses for doctoral programs | Requirement | Credit | 2 | |
| Department | Year | ～ | Semester | 3rd | |
| Course type | 3rd | Course code | 1080102 | ||
| Instructor(s) | |||||
| 黒田 裕 [KURODA Yutaka] | |||||
| Facility affiliation | Faculty of Engineering | Office | afjgxte/L1151 | Email address | |
| Course description |
|
Fundamental knowledge of bioinformatics in relation to the sequence, structure, and function of protein will be explained. GoogleClasscode:mwatrlf |
| Expected Learning |
| The students will learn the basics of bioinformatics. |
| Course schedule |
|
Advanced Bioinformatics and Bioinformatics (2021) Classroom: Building 12, L1214 (tentative) Grades: Attendance, reports and Form: Hybrid, online, some face-to-face in view of the spread of infection Date & Time: Fri: 13:00 - 14:30 14:45 - 16:15 (End time may vary slightly) The duration of the lecture is 2x90 minutes, but in reality, the lecture may be completed in 2x60 minutes, or there may be 20 or 30 minutes of supplementary explanation. In addition, we will be analyzing data in class, so please bring your own computer (or use one if it is online). November 12 (Fri), Yutaka Kuroda Introduction, Structural Database, Protein Solubility and Aggregation Friday, November 19, Prof. Takatsuku Hirokawa (University of Tsukuba) Drug Discovery Informatics as a Basis for Drug Design Dec. 10 (Fri) Prof. Hiroyuki Toh (Kwansei Gakuin Univ.; Online) Molecular Evolution from Sequence and Structural Information (Molecular Evolution using PAML/R) Dec. 17 (Fri) Dr. Tamotsu Noguchi (Meiji Pharmaceutical University) New information on protein structure prediction (CASP, αFold) Dec. 24 (Fri) Hiroshi Tsugawa Metabolome analysis Jan. 7 (Fri) Hiroshi Tsugawa Proteome analysis Jan. 14 (Fri) Hiroshi Tsugawa Transcriptome Analysis and Integrated Omics |
| Prerequisites |
| To better understanding, it is recommended to take the lecture of "Basic phycics", "Basic Chemistry" and "Basic biology". |
| Required Text(s) and Materials |
| References |
| Assessment/Grading |
| Class participation + reports |
| Message from instructor(s) |
| Course keywords |
| Office hours |
| Remarks 1 |
| Remarks 2 |
| Related URL |
| Lecture Language |
| English |
| Language Subject |
| Last update |
| 10/5/2021 12:38:10 PM |